Publications

2012年

"In vitro selection of a peptide antagonist of growth hormone secretagogue receptor using cDNA display" Ueno, S., Yoshida, S., Mondal, M., Nishina, K., Koyama, M., Sakata, I., Miura, K., Hayashi, Y., Nemoto, N., Nishigaki, K., and Sakai, K. Proc Natl Acad Sci U S A. (accepted)
○ この４月まで研究員をしていた上野博士の論文がPNASに掲載されます。

“Antagonistic effect of disulfide-rich peptide aptamers selected by cDNA display on interleukin-6-dependent cell proliferation” Nemoto N, Tsutsui C, Yamaguchi J, Ueno S, Machida M, Kobayashi T, Sakai T. Biochem Biophys Res Commun. 421, 129-133 (2012)

“In vitro Selection of Peptide Aptamers against Acetylcholine-binding Protein (AChBP) from Disulfide-rich Peptide Library by cDNA Display” Nemoto, N., Kimura, S., Kumachi, S., Cai, W., Suzuki, M., Nishigaki, K., and Kubo, T., Peptide Science 2011: K. Sakaguchi (Ed.), 89-90 (2012)

“Evolution of Disulfide-Rich Peptide Aptamers Using cDNA Display” Y. Mochizuki and N. Nemoto Methods in Mol. Biol. “Ribosome Display and Related Technologies” Douthwaite, Julie A.; Jackson, Ronald H. (Eds.), 805, 237-250 (2012）

“cDNA Display: Rapid Stabilization of mRNA Display” S. Ueno and N. Nemoto, Methods in Mol. Biol. “Ribosome Display and Related Technologies” Douthwaite, Julie A.; Jackson, Ronald H. (Eds.), 805, 113-135 (2012）

2011年

“One-Pot Preparation of mRNA/cDNA Display by a Novel and Versatile Puromycin-Linker DNA” Y. Mochizuki, M. Biyani, S. Tsuji-Ueno, M. Suzuki, K. Nishigaki, Y. Husimi, and N. Nemoto, ACS comb Sci. DOI: 10.1021/co2000295 (2011)

“Microintaglio Printing of Biomolecules and Its Application to In situ Production of Messenger Ribonucleic Acid Display Microarray” M. Biyani, T. Osawa, N. Nemoto, T. Ichiki, Applied Physics Express, 4, 4, 041101 (2011)

“Novel High-affinity Aβ-binding Peptides Identified by an Advanced In Vitro Evolution, Progressive Library Method” S. Tsuji-Ueno, M. Komatsu, K. Iguchi, M. Takahashi, S. Yoshino, M. SuzukiN. Nemoto, Nishigaki K., Protein Pept Lett. 18, 6, 642-650 (2011)

“Directed evolution of a three-finger neurotoxin by using cDNA display yields antagonists as well as agonists of interleukin-6 receptor signaling” M. Naimuddin, S. Kobayashi, C. Tsutsui, M. Machida, N. Nemoto, T. Sakai, T. Kubo, Mol. Brain, 4, 2 (2011)

2010年

“Gel shift selection of translation enhancer sequences using messenger RNA display” M. Biyani, M. Biyani, N. Nemoto, T. Ichiki, K. Nishigaki, Y. Husimi, Anal. Biochem. Vol.409, pp.105-111 (2010)

“DNA-linked protein array for high-throughput proteomics: from spatially unknown DNA arrays to identifiable protein arrays” Biyani, M., Nemoto, N. and Ichiki, T., Nano LIFE, 1, 33-43 (2010)

“In vitro Selection of Cysteine-rich Peptide Aptamers against the IL-6 Receptor using cDNA display” N. Nemoto, J. Yamaguchi, M. Naimuddin, M. Machida and Y. Husimi, Peptide Science 2009: K. Okamoto (Ed.), 115-118 (2010)

2009年

“cDNA display: a novel screening methods for functional disulfide-rich peptides by solid-phase synthesis and stabilization of mRNA-protein fusions.”
Yamaguchi, J., Naimuddin, M., Biyani, M., Sasaki, T., Machida, M., Kubo, T., Funatsu, T., Husimi, Y. and Nemoto, N. Nucleic Acids Res. 37, e108 (2009)

“Development of systemic in vitro evolution and its application to generation of peptide-aptamer-based inhibitors of cathepsin E.” Kitamura, K., Yoshida, C., Kinoshita, Y., Kadowaki, T., Takahashi, Y., Tayama, T., Kawakubo,T., Naimuddin, M., Salimullah, M., Nemoto, N., Hanada, K., Husimi, Y., Yamamoto, K. and Nishigaki,K. J Mol Biol. 387, 1186-1198 (2009)

“Host-parasite relations of bacteria and phages can be unveiled by oligostickiness, a measure of relaxed sequence similarity” Ahmed, S., Saito, A., Suzuki, M., Nemoto, N. and Nishigaki K.　 Bioinformatics, 25, 563-570 (2009)